Animation of the abundance spectra
animateSpectra( sim, species, wlim = c(NA, NA), ylim = c(NA, NA), power = 1, total = FALSE, plankton = TRUE )
sim | A MizerSim object |
---|---|
species | Name or vector of names of the species to be plotted. By default all species are plotted. |
wlim | A numeric vector of length two providing lower and upper limits for the w axis. Use NA to refer to the existing minimum or maximum. |
ylim | A numeric vector of length two providing lower and upper limits for the y axis. Use NA to refer to the existing minimum or maximum. Any values below 1e-20 are always cut off. |
power | The abundance is plotted as the number density times the weight
raised to |
total | A boolean value that determines whether the total over all species in the system is plotted as well. Default is FALSE |
plankton | A boolean value that determines whether plankton is included. Default is TRUE. |
Other plotting functions:
displayFrames()
,
plot,MizerSim,missing-method
,
plotBiomass()
,
plotDiet()
,
plotFMort()
,
plotFeedingLevel()
,
plotGrowthCurves()
,
plotPredMort()
,
plotSpectra()
,
plotYieldGear()
,
plotYield()
,
plotlyBiomass()
,
plotlyFMort()
,
plotlyFeedingLevel()
,
plotlyGrowthCurves()
,
plotlyPredMort()
,
plotlySpectra()
,
plotlyYieldGear()
,
plotlyYield()
,
plotting_functions