Animation of the abundance spectra
animateSpectra( sim, species, wlim = c(NA, NA), ylim = c(NA, NA), power = 1, total = FALSE, plankton = TRUE )
| sim | A MizerSim object |
|---|---|
| species | Name or vector of names of the species to be plotted. By default all species are plotted. |
| wlim | A numeric vector of length two providing lower and upper limits for the w axis. Use NA to refer to the existing minimum or maximum. |
| ylim | A numeric vector of length two providing lower and upper limits for the y axis. Use NA to refer to the existing minimum or maximum. Any values below 1e-20 are always cut off. |
| power | The abundance is plotted as the number density times the weight
raised to |
| total | A boolean value that determines whether the total over all species in the system is plotted as well. Default is FALSE |
| plankton | A boolean value that determines whether plankton is included. Default is TRUE. |
Other plotting functions:
displayFrames(),
plot,MizerSim,missing-method,
plotBiomass(),
plotDiet(),
plotFMort(),
plotFeedingLevel(),
plotGrowthCurves(),
plotPredMort(),
plotSpectra(),
plotYieldGear(),
plotYield(),
plotlyBiomass(),
plotlyFMort(),
plotlyFeedingLevel(),
plotlyGrowthCurves(),
plotlyPredMort(),
plotlySpectra(),
plotlyYieldGear(),
plotlyYield(),
plotting_functions