An alias provided for backward compatibility with mizer version <= 1.0
getM2(object, n, n_pp, n_other, pred_rate, time_range, drop = TRUE)
| pred_rate | An array of predation rates of dimension no. sp x no.
community size bins x no. of size bins in whole spectra (i.e. community +
plankton, the w_full slot). The array is optional. If it is not provided
it is calculated by the |
|---|
If a MizerParams object is passed in, the function returns a two
dimensional array (prey species x prey size) based on the abundances also
passed in. If a MizerSim object is passed in, the function returns a
three dimensional array (time step x prey species x prey size) with the
predation mortality calculated at every time step in the simulation.
Dimensions may be dropped if they have length 1 unless `drop = FALSE`.
Other rate functions:
getEGrowth(),
getEReproAndGrowth(),
getERepro(),
getEncounter(),
getFMortGear(),
getFMort(),
getFeedingLevel(),
getMort(),
getPlanktonMort(),
getPredRate(),
getRDD(),
getRDI(),
getRates(),
getStarvMort()
if (FALSE) { data(NS_species_params_gears) data(inter) params <- newMultispeciesParams(NS_species_params_gears, inter) # With constant fishing effort for all gears for 20 time steps sim <- project(params, t_max = 20, effort = 0.5) # Get predation mortality at one time step n <- sim@n[21,,] n_pp <- sim@n_pp[21,] getPredMort(params,n,n_pp) # Get predation mortality at all saved time steps getPredMort(sim) # Get predation mortality over the time 15 - 20 getPredMort(sim, time_range = c(15,20)) }