A class to hold the results of a simulation

A class that holds the results of projecting a MizerParams object through time using the project function.

Details

A new MizerSim object can be created with the MizerSim constructor, but you will never have to do that because the object is created automatically by the project function when needed.

The arrays all have named dimensions. The names of the "time" dimension are numeric and denote the time in years. The names of the "sp" dimension are the same as the species name in the order specified in the species_params data frame. The names of the "gear" dimension are the names of the gears, in the same order as specified when setting up the MizerParams object.

There are several link{summary_functions} and plotting_functions available to explore the contents of a MizerSim object.

Slots

params

An object of type MizerParams.

n

Array that stores the projected community population abundances by time, species and size.

n_pp

Array that stores the projected plankton abundance by time and size.

n_other

List of lists where the outer list is named by time and the inner lists are named by the names of the other ecosystem components.

effort

Array that stores the fishing effort by time and gear.